gt-featureindex1
Retrieve annotations from a persistent feature index as gff3 output.
Usage
gt featureindex
[option ...]
indexfilename
Overview
-range [start end]
range constraint for index query (default: undefined)
-
-seqid [string] -
sequence region (default: undefined)
-
-retain [yes|no] -
retain attributes (default: yes)
-
-backend [...] -
database backend to use choose from [sqlite] (default: sqlite)
-
-filename [string] -
filename for feature database (sqlite backend only) (default: undefined)
-
-v [yes|no] -
be verbose (default: no)
-
-help -
display help and exit
-
-version -
display version information and exit
Releases
6 releases since Debian 8 (Jessie); the text changed 5 times.