gt-encseq2spm1
Compute suffix prefix matches from encoded sequence.
Usage
gt encseq2spm
[option ...]
[file]
Overview
-
-l [value] -
specify the minimum length (default: 0)
-
-parts [value] -
specify the number of parts (default: 0)
-
-memlimit [string] -
specify maximal amount of memory to be used during index construction (in bytes, the keywords MB and GB are allowed) (default: undefined)
-
-singlestrand [yes|no] -
use only the forward strand of the sequence (default: no)
-
-spm [string] -
specify output for spms (default: undefined)
-
-ii [string] -
specify the input sequence (default: undefined)
-
-v [yes|no] -
be verbose (default: no)
-
-help -
display help and exit
-
-version -
display version information and exit
Releases
6 releases since Debian 8 (Jessie); the text changed 5 times.