gt-encseq-info1
Display meta-information about an encoded sequence.
Usage
gt encseq
info
[option ...]
indexname
Overview
-
-nomap [yes|no] -
do not map encoded sequence (gives less information) (default: no)
-
-mirrored [yes|no] -
use mirrored encoded sequence (DNA only) (default: no)
-
-noindexname [yes|no] -
do not output index name (default: no)
-
-show_alphabet [yes|no] -
output alphabet definition (default: no)
-
-n50 [yes|no] -
show N50 values (minimum length of largest sequences for covering at least 50% of total sequence length) (default: no)
-
-o [filename] -
redirect output to specified file (default: undefined)
-
-gzip [yes|no] -
write gzip compressed output file (default: no)
-
-bzip2 [yes|no] -
write bzip2 compressed output file (default: no)
-
-force [yes|no] -
force writing to output file (default: no)
-
-help -
display help and exit
-
-version -
display version information and exit
Releases
6 releases since Debian 8 (Jessie); the text changed 5 times.