gt-compreads-refdecompress1
Decodes a given rcr (reference compressed reads).
Usage
gt compreads
refdecompress
[option ...]
(-file
file)
Overview
-
-v [yes|no] -
be verbose (default: no)
-
-qnames [yes|no] -
decode read names, default is to just number them (default: no)
-
-ref [string] -
Index file (generated by the gt encseq tool) for reference genome. (default: undefined)
-
-rcr [string] -
specify base name of file containing RCR. (default: undefined)
-
-name [string] -
specify base name for decoded RCR (suffix will be ".rcr.decoded") (default: undefined)
-
-help -
display help and exit
-
-version -
display version information and exit
Releases
6 releases since Debian 8 (Jessie); the text changed 5 times.