gt-bed_to_gff31
Parse bed file and convert it to gff3.
Usage
gt bed_to_gff3
[BED_file]
Overview
-
-featuretype [string] -
Set type of parsed BED features (default: BED_feature)
-
-thicktype [string] -
Set type of parsed thick BED features (default: BED_thick_feature)
-
-blocktype [string] -
Set type of parsed BED blocks (default: BED_block)
-
-o [filename] -
redirect output to specified file (default: undefined)
-
-gzip [yes|no] -
write gzip compressed output file (default: no)
-
-bzip2 [yes|no] -
write bzip2 compressed output file (default: no)
-
-force [yes|no] -
force writing to output file (default: no)
-
-help -
display help and exit
-
-version -
display version information and exit
Releases
6 releases since Debian 8 (Jessie); the text changed 5 times.