graphlan_annotate1
Graphlan annotate module
Usage
graphlan_annotate [-h]
[--annot
annotation_file]
[-v]
input_tree
[output_tree]
Overview
GraPhlAn is a software tool for producing high-quality circular representations of taxonomic and phylogenetic trees. It focuses on concise, integrative, informative, and publication-ready representations of phylogenetically- and taxonomically-driven investigation.
graphlan_annotate is the annotate module of graphlan(1).
Options
positional arguments:
- input_tree
-
the input tree in Newick, Nexus, PhyloXML or plain text format
- output_tree
-
the output tree in PhyloXML format containing the newly added annotations. If not specified, the input tree file will be overwritten
optional arguments:
-
-h, --help -
show this help message and exit
-
--annot annotation_file -
specify the annotation file
-
-v, --version -
Prints the current GraPhlAn version and exit
Releases
Unchanged in 5 releases since Debian 9 (Stretch).