gfadiff(1)

gfadiff1

Compare two gfa files

Usage

gfadiff [-h] [-s] [-l] [-c] [-p] [-i] [-script] <gfa1> <gfa2>

Overview

If a combination of -h,-s,-l,-c and/or -p is specified, then only record of the specified type [h=headers, s=segments, l=links, c=containments, p=paths] are compared. (default: -h -s -l -c -p)

Options

-i

output message if identical

-script

create Ruby script to transform gfa1 into gfa2

Releases

5 releases since Debian 9 (Stretch); the text changed 3 times.

  1. 9
  2. 10
  3. 11–12
  4. 13

Bugs

Please report bugs to the RGFA issue tracker: <https://github.com/ggonnella/rgfa/issues>

From ruby-rgfa 1.3.1+dfsg-3 in Debian 13 (Trixie). Parsed by carta from the page's man source.