get_genus_vfdb1
Automate generation of a vfdb gene database for a specified genus for use with srst2
Usage
get_genus_vfdb <vfdbfile>
<genus>
<outputfolder>
Overview
This tool is part of the SRST2 suite.
This is a utility that automates generation of a VFDB gene database for a specified genus for use with srst2(1).
Examples
-
get_genus_vfdb.sh ./CP_VFs.ffn Bacillus ./VFDB
Releases
Unchanged in 5 releases since Debian 9 (Stretch).