genome-music-bmr1p
Calculate gene coverages and background mutation rates.
Usage
genome music
bmr ...
genome music bmr
Version
This document describes genome music bmr version 0.04 (2018-07-05 at 09:17:13)
Overview
These tools are part of the MuSiC suite.
Sub-commands
General
calc-bmr-
- Calculates mutation rates given per-gene coverage (from "music bmr calc-covg"), and a mutation list
calc-covg-
- Uses calcRoiCovg.c to count covered bases per-gene for each given tumor-normal pair of BAMs.
calc-covg-helper-
- Uses calcRoiCovg.c to count covered bases per-gene for a tumor-normal pair of BAMs.
calc-wig-covg-
- Count covered bases per-gene for each given wiggle track format file.
Releases
3 releases since Debian 8 (Jessie); the text changed 2 times.