gbf2facds(1)

gbf2facds1

Convert ncbi genbank flatfile coding sequences to fasta

Usage

gbf2facds [{[-] nuc | [-] NUC | [-] na | [-] NA | [-] prt | [-] PRT | [-] aa | [-] AA}]

Overview

gbf2facds reads an NCBI GenBank flatfile from standard input and writes FASTA corresponding to its (optionally translated) coding regions to standard output.

Options

[-]nuc|[-]NUC|[-]na|[-]NA

Print transcribed nucleotides (default).

[-]prt|[-]PRT|[-]aa|[-]AA

Print translated amino acids.

From ncbi-entrez-direct 24.0.20250523+dfsg-1+b1 in Debian 13 (Trixie). Parsed by carta from the page's man source.