filterBam(1) on Linux
The text 26692bc11e45, as Debian 9 (Stretch) shipped it.
filter BAM file for use with AUGUSTUS tools
Flags it lists
-
--best -
--commonGeneFile -
--insertLimit -
--maxIntronLen -
--maxSortesTest -
--minCover -
--minId -
--minIntronLen -
--noIntrons -
--pairBedFile -
--paired -
--pairwiseAlignments -
--uniq -
--uniqThresh -
--verbose