fastaq_to_orfs_gff1
Overview
fastaq_to_orfs_gff [options] <fasta/q in> <gff_out>
Writes a GFF file of open reading frames from a fasta/q file
positional arguments:
infile
|
Name of input fasta/q file |
|---|---|
gff_out
|
Name of output gff file |
optional arguments:
-
-h, --help -
show this help message and exit
-
--min_length INT -
Minimum length of ORF, in nucleotides [300]
Copying
Wellcome Trust Sanger Institute Copyright © 2013 Wellcome Trust Sanger Institute This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version.