fastaq_enumerate_names1
Overview
fastaq_enumerate_names [options] <fasta/q in> <fasta/q out>
Renames sequences in a file, calling them 1,2,3... etc
positional arguments:
infile
|
Name of fasta/q file to be read |
|---|---|
outfile
|
Name of output fasta/q file |
optional arguments:
-
-h, --help -
show this help message and exit
-
--start_index START_INDEX -
Starting number [1]
-
--rename_file RENAME_FILE -
If used, will write a file of old name to new name
-
--keep_suffix -
Use this to keep a /1 or /2 suffix at the end of each name
Copying
Wellcome Trust Sanger Institute Copyright © 2013 Wellcome Trust Sanger Institute This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 3 of the License, or (at your option) any later version.