fastaq-scaffolds_to_contigs1
Creates a file of contigs from a file of scaffolds
Overview
usage: fastaq_scaffolds_to_contigs [options] <infile> <outfile>
Creates a file of contigs from a file of scaffolds - i.e. breaks at every gap in the input
positional arguments:
infile
|
Name of input file |
|---|---|
outfile
|
Name of output contigs file |
options:
-
-h, --help -
show this help message and exit
-
--number_contigs -
Use this to enumerate contig names 1,2,3,... within each scaffold
Releases
5 releases since Debian 9 (Stretch); the text changed 4 times.