fastaq-make_random_contigs1
Make contigs of random sequence
Overview
usage: fastaq_make_random_contigs [options] <contigs> <length> <outfile>
Makes a multi-FASTA file of random sequences, all of the same length. Each base has equal chance of being A,C,G or T
positional arguments:
contigs
|
Number of contigs to make |
|---|---|
length
|
Length of each contig |
outfile
|
Name of output file |
options:
-
-h, --help -
show this help message and exit
-
--first_number FIRST_NUMBER -
If numbering the sequences, the first sequence gets this number [1]
-
--name_by_letters -
Name the contigs A,B,C,... will start at A again if you get to Z
-
--prefix PREFIX -
Prefix to add to start of every sequence name
-
--seed SEED -
Seed for random number generator. Default is to use python's default
Releases
5 releases since Debian 9 (Stretch); the text changed 4 times.