fastaq-enumerate_names(1)

fastaq-enumerate_names1

Renames sequences in a file, calling them 1,2,3... etc

Overview

usage: fastaq_enumerate_names [options] <infile> <outfile>

Renames sequences in a file, calling them 1,2,3... etc

positional arguments:

infile

Name of fasta/q file to be read

outfile

Name of output fasta/q file

options:

-h, --help

show this help message and exit

--start_index START_INDEX

Starting number [1]

--rename_file RENAME_FILE

If used, will write a file of old name to new name

--keep_suffix

Use this to keep a /1 or /2 suffix at the end of each name

--suffix SUFFIX

Add the given string to the end of every name

Releases

5 releases since Debian 9 (Stretch); the text changed 4 times.

  1. 9
  2. 10
  3. 11
  4. 12
  5. 13

From fastaq 3.17.0-9 in Debian 13 (Trixie). Parsed by carta from the page's man source.