fastaq-capillary_to_pairs1
Converts file of capillary reads to paired and unpaired files
Overview
usage: fastaq_capillary_to_pairs <infile> <outfiles prefix>
Given a file of capillary reads, makes an interleaved file of read pairs (where more than read from same ligation, takes the longest read) and a file of unpaired reads. Replaces the .p1k/.q1k part of read names to denote fwd/rev reads with /1 and /2
positional arguments:
infile
|
Name of input fasta/q file |
|---|---|
outfiles prefix
|
Prefix of output files |
options:
-
-h, --help -
show this help message and exit
Releases
5 releases since Debian 9 (Stretch); the text changed 4 times.