fastaq-caf_to_fastq1
Converts a caf file to fastq format
Overview
usage: fastaq_caf_to_fastq [options] <infile> <outfile>
Converts CAF file to FASTQ format
positional arguments:
infile
|
Name of input CAF file. |
|---|---|
outfile
|
Name of output FASTQ file |
options:
-
-h, --help -
show this help message and exit
-
-c, --clip -
Use clipping info to clip reads, if present in the input CAF file (as lines of the form "Clipping QUAL start end"). Default is to not clip
-
-l INT, --min_length INT -
Minimum length of sequence to output [1]
Releases
5 releases since Debian 9 (Stretch); the text changed 4 times.