emowse(1e)

emowse1e

Search protein sequences by digest fragment molecular weight

Usage

emowse -sequence seqall -infile infile -mwdata datafile -frequencies datafile -weight integer -mono boolean -enzyme list -pcrange integer -tolerance float -partials float -outfile outfile

emowse -help

Overview

emowse is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Protein:Composition" command group(s).

Options

Input section

-sequence seqall
-infile infile
-mwdata datafile

Default value: Emolwt.dat

-frequencies datafile

Default value: Efreqs.dat

Required section

-weight integer
-mono boolean

Default value: N

Advanced section

-enzyme list

Default value: 1

-pcrange integer

Default value: 25

-tolerance float

Default value: 0.1

-partials float

Default value: 0.4

Output section

-outfile outfile

Releases

9 releases since Debian 5.0 (Lenny); the text changed 2 times.

  1. 5.0
  2. 6.0
  3. 7–13

-mono since Debian 6.0 (Squeeze); -mwdata since Debian 6.0 (Squeeze).

-aadata until Debian 5.0 (Lenny).

Bugs

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

Author

Debian Med Packaging Team <[email protected]>

Wrote the script used to autogenerate this manual page.

From emboss 6.6.0+dfsg-15 in Debian 13 (Trixie). Parsed by carta from the page's man source.