dotpath1e

Draw a non-overlapping wordmatch dotplot of two sequences

Usage

dotpath -asequence sequence -bsequence sequence -wordsize integer [-overlaps boolean] [-boxit boolean] -graph graph

dotpath -help

Overview

dotpath is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Alignment:Dot plots" command group(s).

Options

Input section

-asequence sequence

-bsequence sequence

Required section

-wordsize integer: Default value: 4

Output section

-overlaps boolean: Displays the overlapping matches (in red) as well as the minimal set of non-overlapping matches Default value: N

-boxit boolean: Default value: Y

-graph graph

Releases

9 releases since Debian 5.0 (Lenny); the text changed 2 times.

5.0
6.0
7–13