dbxobo1e
Index an obo ontology using b+tree indices
Usage
dbxobo -dbname
string
-standardname
string
-dbresource
string
-directory
directory
-filenames
string
-fields
list
-compressed
boolean
-release
string
-date
string
-exclude
string
-indexoutdir
outdir
-outfile
outfile
dbxobo -help
Overview
dbxobo is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Utils:Database indexing" command group(s).
Options
Input section
-
-dbname string
-
-standardname string -
Default value: $(dbname)
-
-dbresource string -
Default value: oboresource
-
-directory directory -
Default value: .
-
-filenames string -
Default value: *.obo
Required section
-
-fields list -
Default value: *
-
-compressed boolean -
Default value: Y
Advanced section
-
-release string -
Default value: 0.0
-
-date string -
Default value: 00/00/00
-
-exclude string
Output section
-
-indexoutdir outdir -
Default value: .
-
-outfile outfile
Releases
Unchanged in 7 releases since Debian 7 (Wheezy).