dbifasta(1e)

Usage

dbifasta -dbname string -idformat list -directory directory -filenames string -release string -date string -fields list -exclude string -maxindex integer -sortoptions string -systemsort boolean -cleanup boolean -outfile outfile -indexoutdir outdir

dbifasta -help

Overview

dbifasta is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Utils:Database indexing" command group(s).

Options

Input section

-dbname string

-idformat list: Default value: idacc

-directory directory: Default value: .

-filenames string: Default value: *.dat

Required section

-release string: Default value: 0.0

-date string: Default value: 00/00/00

Advanced section

-fields list: Default value: acc

-exclude string

-maxindex integer

-sortoptions string: Sort options, typically '-T .' to use current directory for work files and '-k 1,1' to force GNU sort to use the first field Default value: -T . -k 1,1

-systemsort boolean: Default value: Y

-cleanup boolean: Default value: Y

Output section

-outfile outfile

-indexoutdir outdir: Default value: .

Releases

9 releases since Debian 5.0 (Lenny); the text changed 2 times.