dbiblast(1e)

Usage

dbiblast -dbname string -directory directory -filenames string -release string -date string -seqtype list -blastversion list -fields list -exclude string -sortoptions string -maxindex integer -systemsort boolean -cleanup boolean -sourcefile boolean -outfile outfile -indexoutdir outdir

dbiblast -help

Overview

dbiblast is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Utils:Database indexing" command group(s).

Options

Input section

-dbname string

-directory directory: Default value: .

-filenames string: Default value: $(dbname)

Required section

-release string: Default value: 0.0

-date string: Default value: 00/00/00

-seqtype list: Default value: unknown

-blastversion list: Default value: unknown

Advanced section

-fields list: Default value: acc

-exclude string

-sortoptions string: Sort options, typically '-T .' to use current directory for work files and '-k 1,1' to force GNU sort to use the first field Default value: -T . -k 1,1

-maxindex integer

-systemsort boolean: Default value: Y

-cleanup boolean: Default value: Y

-sourcefile boolean

Output section

-outfile outfile

-indexoutdir outdir: Default value: .

Releases

9 releases since Debian 5.0 (Lenny); the text changed 2 times.