combine_tradis_plots1

Bio-tradis: combine multiple plotfiles and generate updated statistics

Usage

combine_tradis_plots -p plots.txt

Overview

Combine multiple plotfiles and generate updated statistics for the combined files. Takes a tab-delimited file with an ID as the first column followed by a list of plotfiles to combine per row. The ID will be used to name the new plotfile and as an identifier in the stats file, so ensure these are unique.

For example, an input file named plots_to_combine.txt:

	tradis1 plot1.1.gz plot1.2.gz plot1.3.gz
	tradis2 plot2.1.gz plot2.2.gz
	tradis3 plot3.1.gz plot3.2.gz plot3.3.gz plot3.4.gz

will produce

1: a directory named combined with 3 files - tradis1.insertion_site_plot.gz, tradis2.insertion_site_plot.gz, tradis3.insertion_site_plot.gz

2: a stats file named plots_to_combine.stats

Options

`-p\|plotfile`	file with plots to be combined
`-o\|output_dir`	name of directory for output (default: combined)