collapse_partials1
Collection of tools to annotate genomes using long read transcriptomics data
Overview
Usage of collapse_partials:
-
-M -
Discard monoexonic transcripts.
-
-U -
Discard transcripts which are not oriented.
-
-V -
Print out version.
-d int
-
Internal exon boundary tolerance. (default 5)
-e int
-
Three prime exons boundary tolerance. (default 30)
-f int
-
Five prime exons boundary tolerance. (default 5000)
-
-h -
Print out help message.
-prof string
-
Write out CPU profiling information.
-t int
-
Number of cores to use. (default 4)
Releases
Unchanged in 3 releases since Debian 11 (Bullseye).