cnvkit-import-picard(1) on Linux
The text e2277068b2a2, as Debian 13 (Trixie) shipped it. The page shows this text now.
Convert Picard CalculateHsMetrics tabular output to CNVkit .cnn files. The input file is generated by the PER_TARGET_COVERAGE option in the CalculateHsMetrics script in Picard tools. If 'antitarget' is in the input filename, the generated output filename will have the suffix '.antitargetcoverage.cnn', otherwise '.targetcoverage.cnn'.
Flags it lists
-
--help -
--output-dir -
-d -
-h