cmtk-interleaved_bad_slices(1) on Linux
The text 4b28e83a2aa2, as Debian 10 (Buster) shipped it.
Find bad slices in a time series of interleaved images (e.g., a resting-state fMRI series).
Flags it lists
-
--axial -
--bad-slices-thresh -
--coronal -
--echo -
--help -
--help-all -
--man -
--metric -
--ncc -
--rms -
--sagittal -
--slice-orientation -
--slice-x -
--slice-y -
--slice-z -
--stdev-thresh -
--threads -
--verbose -
--verbose-level -
--version -
--wiki -
-v