cmtk-groupwise_warp(1) on Linux
The text b4c9e0d34e3e, as Debian 12 (Bookworm) shipped it.
Nonrigid population registration
Flags it lists
-
--accuracy -
--activate-uninformative -
--average-cubic -
--bending-energy-weight -
--congeal -
--crop-histograms -
--delta-f-threshold -
--disable-cp-mask -
--disable-optimization -
--downsample-from -
--downsample-to -
--echo -
--exploration -
--force-background -
--grid-spacing -
--grid-spacing-fit -
--help -
--help-all -
--histogram-bins -
--jacobian-weight -
--man -
--match-histograms -
--no-output-average -
--normal-group-first-n -
--output -
--output-average -
--output-root -
--partial-gradient-thresh -
--refine-grid -
--repeat-match-histograms -
--rmi -
--sampling-density -
--smooth-cps -
--smooth-pixels -
--step-factor -
--template -
--template-with-data -
--threads -
--verbose -
--verbose-level -
--version -
--wiki -
--zero-sum -
--zero-sum-first-n -
--zero-sum-no-affine -
-B -
-D -
-E -
-H -
-J -
-N -
-O -
-S -
-T -
-Z -
-a -
-d -
-e -
-o -
-p -
-r -
-s -
-t -
-v -
-z