cmtk-fit_spline_dfield1
Deformation field to transformation
Usage
fit_spline_dfield InputDField
OutputXform
Overview
Fit a parametric nonrigid transformation (B-spline free-form deformation) to a deformation field
Options
Global Toolkit Options (these are shared by all CMTK tools)
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--help -
Write list of basic command line options to standard output.
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--help-all -
Write complete list of basic and advanced command line options to standard output.
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--wiki -
Write list of command line options to standard output in MediaWiki markup.
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--man -
Write man page source in 'nroff' markup to standard output.
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--version -
Write toolkit version to standard output.
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--echo -
Write the current command line to standard output.
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--verbose-level <integer> -
Set verbosity level.
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--verbose, -v -
Increment verbosity level by 1 (deprecated; supported for backward compatibility).
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--threads <integer> -
Set maximum number of parallel threads (for POSIX threads and OpenMP).
Input Options
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--absolute -
Input is an absolute transformation field [x maps to input(x)] [This is the default]
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--relative -
Input is relative deformation field, e.g., a gradient or force field [x maps to x+input(x)]
Fitting Options
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--levels <integer> -
Number of levels in the multi-level B-spline approximation procedure. [Default: 1]
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--fit-affine-first -
Fit affine transformation first, then initialize spline with it.
Output Options
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--final-cp-spacing <double> -
Final control point grid spacing of the output B-spline transformation. [Default: 0]
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--final-cp-dims <string> -
Final control point grid dimensions (i.e., number of controlpoints) of the output B-spline transformation. To be provided as 'dimX,dimY,dimZ'. [Default: NONE]
Acknowledgments
CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September 2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.
Releases
7 releases since Debian 7 (Wheezy); the text changed 6 times.