cmtk-filter1

Global Toolkit Options (these are shared by all CMTK tools)

--help

Write list of basic command line options to standard output.

--help-all

Write complete list of basic and advanced command line options to standard output.

--wiki

Write list of command line options to standard output in MediaWiki markup.

--man

Write man page source in 'nroff' markup to standard output.

--version

Write toolkit version to standard output.

--echo

Write the current command line to standard output.

--verbose-level <integer>

Set verbosity level.

--verbose, -v

Increment verbosity level by 1 (deprecated; supported for backward compatibility).

--threads <integer>

Set maximum number of parallel threads (for POSIX threads and OpenMP).

Main Options

--gaussian <float>, -g <float>

Gaussian filter width (sigma) [Default: disabled]

--radius <float>, -r <float>

Filter radius (truncated outside) [Default: 2]

--mask <string>, -m <string>

Binary mask file name [Default: NONE]

--studholme, -s

Use Studholme's consistent filtering

--bin-width <float>, -b <float>

Intensity bin width for consistent filtering [Default: 10]

--rohlfing, -R

Use Rohlfing's single-image consistent filtering

--intensity-gaussian <float>, -G <float>

Intensity gaussian sigma for consistent filtering [Default: 0]

Image/Transformation Database

--db <string>

Path to image/transformation database that should be updated with the newly created image. [Default: NONE]