checkTargetSortedness(1)

checkTargetSortedness1

Check bam file for sortedness

Usage

checkTargetSortedness infile.bam

Options

'infile.bam' is the name of the BAM file to check for sortedness. The program will output a short message describing the sortedness status of the file.

Additional documentation

An exhaustive documentation can be found in the file /usr/share/augustus/README.TXT.

Releases

2 releases since Debian 9 (Stretch); the text changed 1 time.

  1. 9
  2. 10

Authors

AUGUSTUS was written by M. Stanke, O. Keller, S. König, L. Gerischer and L. Romoth.

From augustus 3.3.2+dfsg-2 in Debian 10 (Buster). Parsed by carta from the page's man source.