cdhit-2d(1) on Linux
The text 17cd58f94a7c, as Debian 7 (Wheezy) shipped it.
quickly group sequences in db1 or db2 format
Flags it lists
-
-A -
-AL -
-AS -
-B -
-G -
-M -
-S -
-S2 -
-T -
-U -
-aL -
-aS -
-b -
-c -
-d -
-g -
-h -
-i -
-i2 -
-l -
-n -
-o -
-p -
-s -
-s2 -
-t -
-uL -
-uS