bp_tree2pag(1p)

bp_tree2pag1p

Convert bio::treeio parseable format trees to pagel format

Usage

bp_tree2pag -if nexus -i file.nexus > file.pag

cat {file.newick | bp_tree2pag -if newick > file.nh}

bp_tree2pag -o file.pag -i file.newick

Overview

Convert TreeIO parseable files into Pagel format tree files. Be warned that pagel format only really supports a single tree per file so. Also Pagel parsing is not yet available in bioperl.

Releases

9 releases since Debian 5.0 (Lenny); the text changed 7 times.

  1. 5.0
  2. 6.0
  3. 7
  4. 8
  5. 9
  6. 10
  7. 11
  8. 12–13

From bioperl 1.7.8-1 in Debian 13 (Trixie). Parsed by carta from the page's man source.