bp_meta_gff1p
Get/set bio::db::gff meta-data
Usage
# set the following meta data values% bp_meta_gff.pl -d testdb tag1=value1 tag2=value2# get the indicated meta data value% bp_meta_gff.pl -d testdb tag1 tag2
Overview
This script gets or sets metadata in a Bio::DB::GFF database. Not all adaptors support this operation! To set a series of tags, pass a set of tag=value pairs to the script. To get the contents of a series of tags, pass the bare tag names.
The output from the get operation will be an easily parseable set of tag=value pairs, one per line.
Options
Command-line options can be abbreviated to single-letter options. e.g. -d instead of --database.
--database <dsn> Mysql database name (default dbi:mysql:test)--adaptor <adaptor> Mysql adaptor (default dbi::mysqlopt)--user <user> Username for mysql authentication--pass <password> Password for mysql authentication
Releases
9 releases since Debian 5.0 (Lenny); the text changed 6 times.