bp_gccalc1p
Gc content of nucleotide sequences
Usage
bp_gccalc [-f/--format
FORMAT]
[-h/--help]
filename
or
bp_gccalc [-f/--format
FORMAT]
<
filename
or
bp_gccalc [-f/--format
FORMAT]
-i
filename
Overview
This scripts prints out the GC content for every nucleotide sequence from the input file.
Options
The default sequence format is fasta.
The sequence input can be provided using any of the three methods:
- unnamed argument
-
bp_gccalc filename
- named argument
-
bp_gccalc -i filename
- standard input
-
bp_gccalc < filename
Feedback
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
[email protected] - General discussionhttp://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bioperl-live/issuesAUTHOR - Jason Stajich
Email [email protected]
Releases
9 releases since Debian 5.0 (Lenny); the text changed 7 times.