asnmacro(1)

asnmacro1

Process asn.1 biological data per sequin macros

Usage

asnmacro [-] [-b] [-d] [-e] [-i filename] [-k n] [-l n] -m filename [-o filename] [-p path] [-r path] [-s str] [-x str]

Overview

asnmacro is a command-line tool to run Sequin macros on annotated biological sequence data represented according to NCBI's ASN.1 specifications.

Options

A summary of options is included below.

-

Print usage message

-b

Input is Binary

-d

Output is binary

-e

Input is a Seq-Entry

-i filename

Single input file

-k n

Skip steps

-l n

Limit steps

-m filename

Macro file

-o filename

Single Output file

-p path

Path to multiple input files

-r path

Path for Results when processing multiple files

-s str

Suffix for stripped (output) files

-x str

Suffix for input files with -p (.sqn by default)

Releases

7 releases since Debian 7 (Wheezy); the text changed 1 time.

  1. 7–8
  2. 9–13

-k since Debian 9 (Stretch); -l since Debian 9 (Stretch).

Author

The National Center for Biotechnology Information.

From ncbi-tools-bin 6.1.20170106+dfsg2-6 in Debian 13 (Trixie). Parsed by carta from the page's man source.