aevol_misc_lineage1
An in silico experimental evolution platform
Usage
aevol_misc_lineage {-h | --help}
aevol_misc_lineage {-V | --version}
aevol_misc_lineage [-b
TIMESTEP]
[-e
TIMESTEP]
[{-I
INDEX | -R
RANK}]
[-F]
[-v]
Overview
Aevol is a simulation platform that allows one to let populations of digital organisms evolve in different conditions and study experimentally the mechanisms responsible for the structuration of the genome and the transcriptome.
aevol_misc_lineage-
reconstruct the lineage of a given individual from the tree files
Options
-
-h, --help -
print help, then exit
-
-V, --version -
print version number, then exit
-b, --begin TIMESTEP
specify time t0 up to which to reconstruct the lineage
-e, --end TIMESTEP
specify time t_end of the indiv whose lineage is to be reconstructed
-I, --index INDEX
specify the index of the indiv whose lineage is to be reconstructed
-R, --rank RANK
specify the rank of the indiv whose lineage is to be reconstructed default: best individual
-F, --full-check
perform genome checks whenever possible
-v, --verbose
be verbose
Releases
6 releases since Debian 8 (Jessie); the text changed 1 time.