Bio::Tradis::RemoveTags3pm
Remove tags from seqs a fastq file
Usage
Reads in a fastq file with tradis tags already attached to the start of the sequence Removes tags from the sequence and quality strings Outputs a file *.rmtag.fastq unless an out file is specified
use Bio::Tradis::RemoveTags;my $pipeline = Bio::Tradis::RemoveTags->new(fastqfile => 'abc', tag => 'abc');$pipeline->remove_tags();
Version
version 1.4.5
Parameters
Required
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Optional
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Methods
"remove_tags" - output all reads with the tags removed to "outfile"
Copyright and license
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
Releases
3 releases since Debian 11 (Bullseye); the text changed 1 time.