Bio::Roary::IterativeCdhit3pm
Run cdhit iteratively with reducing thresholds, removing full clusters each time
Usage
Run CDhit iteratively with reducing thresholds, removing full clusters each time
use Bio::Roary::IterativeCdhit;
my $obj = Bio::Roary::IterativeCdhit->new(output_cd_hit_filename => 'output_cd_hit_filename.fa',output_combined_filename => 'output_combined_filename.fa',number_of_input_files => 5,output_filtered_clustered_fasta= > 'output_filtered_clustered_fasta.fa',);$obj->run;
Version
version 3.13.0
Copyright and license
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007Releases
5 releases since Debian 9 (Stretch); the text changed 3 times.