Bio::Roary::CombinedProteome(3pm)

Bio::Roary::CombinedProteome3pm

Take in multiple fasta sequences containing proteomes and concat them together and output a fasta file, filtering out more than 5% x's

Usage

Take in multiple FASTA sequences containing proteomes and concat them together and output a FASTA file, filtering out more than 5% X's
use Bio::Roary::CombinedProteome;

   my $obj = Bio::Roary::CombinedProteome->new(
     proteome_files   => ['abc.fa','efg.fa'],
     output_filename   => 'example_output.fa',
     maximum_percentage_of_unknowns => 5.0,
   );
   $obj->create_combined_proteome_file;

Version

version 3.13.0

Releases

5 releases since Debian 9 (Stretch); the text changed 3 times.

  1. 9
  2. 10
  3. 11–12
  4. 13

Author

Andrew J. Page <[email protected]>

From roary 3.13.0+dfsg-2 in Debian 13 (Trixie). Parsed by carta from the page's man source.