Bio::Roary::AnnotateGroups(3pm)

Bio::Roary::AnnotateGroups3pm

Take in a group file and associated gff files for the isolates and update the group name to the gene name

Usage

Take in a group file and associated GFF files for the isolates and update the group name to the gene name
use Bio::Roary::AnnotateGroups;

   my $obj = Bio::Roary::AnnotateGroups->new(
     gff_files   => ['abc.gff','efg.gff'],
     output_filename   => 'example_output.fa',
     groups_filename => 'groupsfile',
   );
   $obj->reannotate;

Version

version 3.13.0

Releases

5 releases since Debian 9 (Stretch); the text changed 3 times.

  1. 9
  2. 10
  3. 11–12
  4. 13

Author

Andrew J. Page <[email protected]>

From roary 3.13.0+dfsg-2 in Debian 13 (Trixie). Parsed by carta from the page's man source.