Bio::Index::AbstractSeq(3pm)

Usage

  # Make a new sequence file indexing package
  package MyShinyNewIndexer;
  use base qw(Bio::Index::AbstractSeq);
  # Now provide the necessary methods...

Overview

Provides a common base class for multiple sequence files built using the Bio::Index::Abstract system, and provides a Bio::DB::SeqI interface.

Feedback

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated.

  [email protected]                  - General discussion
  http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

Support

Please direct usage questions or support issues to the mailing list:

[email protected]

rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:

  https://github.com/bioperl/bioperl-live/issues

AUTHOR - Ewan Birney

Email [email protected]

Appendix

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

Releases

10 releases since Debian 3.0 (Woody); the text changed 8 times.

3.0
5.0
6.0
7
8
9
10
11
12–13