Bio::DB::HTS::Tabix::Iterator3pm
Xs module wrapping around a tabix hts_itr_t
Usage
You shouldn't be instantiating one of these manually it needs a load of pointers. Usage would be through Bio::DB::HTS::Tabix:
use feature qw( say );use Bio::DB::HTS::Tabix;my $tabix = Bio::DB::HTS::Tabix->new( filename => "gerp_plus_plus_31July2014.gz" );say $tabix->header;my $iter = $tabix->query("1:4000005-4000009");while ( my $n = $iter->next ) {say $n;}
Overview
This is returned from Bio::DB::HTS::Tabix, the only method you need to care about is 'next'.
Don't go importing this and calling new on it if you value your sanity, it won't work.
Methods
- "next"
-
Returns a string with the line from the tabix iterator
Releases
3 releases since Debian 11 (Bullseye); the text changed 2 times.