Bio::DB::GFF::Homol(3pm)

Bio::DB::GFF::Homol3pm

Usage

See Bio::DB::GFF.

Overview

Bio::DB::GFF::Homol is a named subtype of Bio::DB::GFF::Segment. It inherits all the methods of its parent, and was created primarily to allow for isa() queries and for compatibility with Ace::Sequence::Homol.

A Homol object is typically returned as the method result of the Bio::DB::GFF::Feature->target() method.

Methods

name

 Title   : name
 Usage   : $name = $homol->name
 Function: get the ID of the homology object
 Returns : a string
 Args    : none
 Status  : Public

asString

 Title   : asString
 Usage   : $name = $homol->asString
 Function: same as name(), for operator overloading
 Returns : a string
 Args    : none
 Status  : Public

id

 Title   : id
 Usage   : $id = $homol->id
 Function: get database ID in class:id format
 Returns : a string
 Args    : none
 Status  : Public

Releases

10 releases since Debian 3.0 (Woody); the text changed 7 times.

  1. 3.0
  2. 5.0
  3. 6.0
  4. 7
  5. 8
  6. 9
  7. 10
  8. 11–13

Bugs

This module is still under development.

Author

Lincoln Stein <[email protected]>.

Copyright (c) 2001 Cold Spring Harbor Laboratory.

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

From libbio-db-gff-perl 1.7.4-1 in Debian 13 (Trixie). Parsed by carta from the page's man source.