seqtax (1e)

Extract a list of taxonomy ids from a sequence entry

  1. Carta.tech
  2. Man Pages
  3. MISSING SECTION
  4. seqtax: Extract a list of taxonomy ids from a sequence entry
  1. Carta.tech
  2. Packages
  3. emboss
  4. seqtax: Extract a list of taxonomy ids from a sequence entry

SYNOPSIS

seqtax -sequence sequence -outfile outfile [-html boolean] seqtax -help

DESCRIPTION

seqtax is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Ontology:Taxonomy" command group(s).

OPTIONS

Input section

-sequence sequence

Required section

Additional section

Advanced section

Output section

-outfile outfile

This is the file of NCBI taxonomy IDs that were found in the input sequnce entry.

Html section

-html boolean

If you are sending the output to a file, this will format it for displaying as a table in a WWW document. Default value: N

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

RELATED TO seqtax…

seqtax is fully documented via the tfm(1) system.

AUTHOR

Debian Med Packaging Team <[email protected]>

Wrote the script used to autogenerate this manual page.

COPYRIGHT

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.