pepinfo (1e)

Plot amino acid properties of a protein sequence in parallel.

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  4. pepinfo: Plot amino acid properties of a protein sequence in parallel.

SYNOPSIS

pepinfo -sequence sequence [-aaproperties datafile] [-aahydropathy datafile] [-hwindow integer] -graph xygraph -outfile outfile -generalplot boolean -hydropathyplot boolean pepinfo -help

DESCRIPTION

pepinfo is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Protein:Composition,Protein:Properties,Display" command group(s).

OPTIONS

Input section

-sequence sequence

-aaproperties datafile

Default value: Eaa_properties.dat

-aahydropathy datafile

Default value: Eaa_hydropathy.dat

Additional section

-hwindow integer

Default value: 9

Output section

-graph xygraph

-outfile outfile

-generalplot boolean

Default value: Y

-hydropathyplot boolean

Default value: Y

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

RELATED TO pepinfo…

pepinfo is fully documented via the tfm(1) system.

AUTHOR

Debian Med Packaging Team <[email protected]>

Wrote the script used to autogenerate this manual page.

COPYRIGHT

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.