equicktandem (1e)

Finds tandem repeats in nucleotide sequences

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  4. equicktandem: Finds tandem repeats in nucleotide sequences

SYNOPSIS

equicktandem -sequence sequence -maxrepeat integer -threshold integer -outfile report -origfile outfile equicktandem -help

DESCRIPTION

equicktandem is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Repeats" command group(s).

OPTIONS

Input section

-sequence sequence

Required section

-maxrepeat integer

Default value: 600

-threshold integer

Default value: 20

Output section

-outfile report

-origfile outfile

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

RELATED TO equicktandem…

equicktandem is fully documented via the tfm(1) system.

AUTHOR

Debian Med Packaging Team <[email protected]>

Wrote the script used to autogenerate this manual page.

COPYRIGHT

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.